Publication



      


Research Papers  Pink, selected
No.
Authors
Title
Journal
Year
Vol
Issue
Page
1
Kotake T., Nakagawa N., Takeda K. and Sakurai N.
Purification and characterization of wall-bound exo-1,3-beta-D-glucanase from barley (Hordeum vulgare L.) seedlings
Plant Cell Physiol.
1997
38

194-200
2
Kotake T., Li Y-Q., Takahashi M. and Sakurai N.
Characterization and function of wall-bound exo-beta-glucanases of Lilium longiflorum pollen tubes
Sex. Plant Reprod.
2000
13

1-9
3
Kotake T., Nakagawa N., Takeda K. and Sakurai N.
Auxin-induced elongation growth and expressions of cell wall-bound exo- and endo-beta-glucanase in barley coleoptiles
Plant Cell Physiol.
2000
41

1272-1278
4
Li Y-Q., Kotake T., Sakurai N., Zhao N-M. and Liu Q.
Role of wall-bound beta-glucanases in regulating tip-growth of Lilium longiflorum pollen tubes
Acta Bot. Sin.
2001
43

461-468
5
Kotake T., Tonari A., Ohta M., Matsuura F. and Sakurai N.
Small complex-type N-linked glycans are attached to cell-wall bound exo-beta-glucanases of both mung bean and barley seedlings
Physiol. Plant.
2001
112

308-314
6
Takeda H., Kotake T., Nakagawa N., Sakurai N. and Nevins D.J.
Expression and function of cell wall-bound cationic peroxidase in Asparagus somatic embryogenesis
Plant Physiol.
2003
131

1765-1774
7
Kotake T., Takada S., Nakahigashi K., Ohto M. and Goto K.
Arabidopsis TERMINAL FLOWER 2 gene encodes a heterochoromatin protein 1 homolog and represses both FLOWERING LOCUS T to regulate flowering time and several homeotic genes
Plant Cell Physiol.
2003
44

555-564
8
Konishi T., Mitome T., Hatsushika H., Haque Md. A., Kotake T. and Tsumuraya Y.
Biosynthesis of pectic beta-(1->4)-galactan by membrane-bound galactosyltransferase from soybean (Glycine max Merr.) seedlings
Planta
2004
213

833-842
9
Urahara T., Tsuchiya K., Kotake T., Tohno-oka T., Komae K., Kawada N. and Tsumuraya Y.
A beta-(1->4)-xylosyltransferase involved in the synthesis of arabinoxylans in developing barley endosperms
Physiol. Plant.
2004
122

169-180
10
Kotake T., Kaneko S., Kubomoto A., Haque Md. A., Kobayashi H. and Tsumuraya Y.
Molecular cloning and expression in Escherichia coli of a Trichoderma viride endo-beta-(1->6)-galactanase gene
Biochem. J.
2004
377

749-755
11
Kotake T., Yamaguchi D., Ohzono H., Hojo S., Kaneko S., Ishida H. and Tsumuraya Y.
UDP-sugar pyrophosphorylase with broad substrate specificity toward various monosaccharide 1-phosphates from pea sprouts
J. Biol. Chem.
2004
279

45728-4573
12
Kotake T., Dina S., Konishi T., Kaneko S., Igarashi K., Samejima M, Watanabe Y., Kimura K. and Tsumuraya Y.
Molecular cloning of a beta-galactosidase from radish that specifically hydrolyzes beta-(1->3)- and beta-(1->6)-galactosyl residues of arabinogalactan-protein
Plant Physiol.
2005
138

1563-1576
13
Ichinose H., Yoshida M., Kotake T., Kuno A., Igarashi K., Tsumuraya Y., Samejima M., Hirabayashi J., Kobayashi H. and Kaneko S.
An exo-beta-1,3-galactanase having a novel beta-1,3-galactan binding module from Phanerochaete chrysosporium
J. Biol. Chem.
2005
280

25820-25829
14
Tsuchiya K., Urahara T., Konishi T., Kotake T., Tohno-oka T., Komae K., Kawada N. and Tsumuraya Y.
Biosynthesis of (1->3),(1->4)-beta-glucan in developing endosperms of barley (Hordeum vulgare L.)
Physiol. Plant
2005
125

181-191
15
Haque Md. A., Kotake T. and Tsumuraya Y.
Mode of action of beta-glucuronidase from Aspergillus niger on the sugar chains of arabinogalactan-protein
Biosci. Biotech. Biochem.
2005
69

2170-2177
16
Ichinose H., Kuno A., Kotake T., Yoshida M., Sakka K., Hirabayashi J., Tsumuraya Y. and Kaneko S.
Characterization of an exo-beta-1,3-galactanase from Clostridium thermocellum
Appl. Environ. Microbiol.
2006
72

3515-3523
17
Kotake T., Tsuchiya K., Aohara T., Konishi T., Kaneko S., Igarashi K., Samejima M. and Tsumuraya Y.
An@alpha-L-arabinofuranosidase/beta-D-xylosidase from immature seeds of radish (Raphanus sativus L.)
J. Exp. Bot.
2006
57

2353-2362
18
Ichinose H., Kotake T., Tsumuraya Y. and Kaneko S.
Characterization of an exo-beta-1,3-D-galactanase from Streptomyces avermitilis NBRC14893 acting on arabinogalactan-protreins
Biosci. Biotech. Biochem.
2006
70

2745-2750
19
Kotake T., Hojo S., Yamaguchi D., Aohara T., Konishi T. and Tsumuraya Y.
Properties and physiological functions of UDP-sugar pyrophosphorylase in Arabidopsis
Biosci. Biotech. Biochem.
2007
71

761-771
20
Konishi T., Kotake T. and Tsumuraya Y.
Chain elongation of pectic beta-(1,4)-galactan by a partially purified galactosyltransferase from soybean (Glycine max Merr.) hypocotyls
Planta
2007
226

571-579
21
Kotake T., Hojo S., Tajima N., Matsuoka K., Koyama T. and Tsumuraya Y.
A bifunctional enzyme with L-fucokinase and GDP-L-fucose pyrophosphorylase activities salvages free L-fucose in Arabidopsis.
J. Biol. Chem.
2008
283

8125-8135
22
Ichinose H., Kotake T., Tsumuraya Y. and Kaneko S.
Characterization of an endo-beta-1,6-galactanase from Streptomyces avermitilis NBRC14893
Appl. Environ. Microbiol.
2008
74

2379-2383
23
Konishi T., Kotake T., Soraya D., Matsuoka K., Koyama T., Kaneko S., Igarashi K., Samejima M. and Tsumuraya Y.
Properties of family 79 beta-glucuronidases that hydrolyze beta-glucuronosyl and 4-O-methyl-beta-glucuronosyl residues of arabinogalactan-protein
Carbohydr. Res.
2008
343

1191-1201
24
Kimpara T. Aohara T., Soga K., Wakabayashi K., Hoson T., Tsumuraya Y.and Kotake T. 
beta-1,3:1,4-Glucan synthase activity in rice seedlings under water
Ann. Bot.
2008
102

221-226
25
Soga K., Kotake T., Wakabayashi K. and Hoson T.
Transient increase in the levels of gamma-tubulin complex in reorientation of cortical microtubules by gravity in azuki bean (Vigna angularis) epicotyls
J. Plant Res.
2008
121

493-498
26
Soga K., Kotake T., Wakabayashi K. and Hoson T.
The transcript level of katanin gene is increased transiently in response to changes in gravitational conditions in azuki bean epicotyls
Biol. Sci. Space
2009
23

22-27
27
Kotake T., Kitazawa K., Takata R., Okabe K., Ichinose H., Kaneko S. and Tsumuraya Y.
Molecular cloning and expression in Pichia pastoris of a Irpex lacteus exo-beta-(1->3)-galactanase gene
Biosci. Biotech. Biochem.
2009
73

2303-2309
28
Tominaga-Wada R., Iwata M., Sugiyama J., Kotake T., Ishida T., Yokoyama R., Nishitani K., Okada K. and Wada T.
The GLABRA2 homeodomain protein directly regulates CESA5 and XTH17 gene expression in Arabidopsis roots
Plant J.
2009
60

564-574
29 Kotake T., Takata R., Verma R., Takaba M., Yamaguchi D., Orita T., Kaneko S., Matsuoka K., Koyama T., Reiter WD. and Tsumuraya Y. Bifunctional cytosolic UDP-glucose 4-epimerases catalyze the interconversion between UDP-D-xylose and UDP-L-arabinose in plants Biochem. J.
2009
424

169-177
30
Aohara T., Kotake T., Kaneko Y., Takatsuji H., Tsumuraya Y. and Kawasaki S. Rice BRITTLE CULM 5 (BRITTLE NODE) is involved in secondary cell wall formation in the sclerenchyma tissue of nodes Plant Cell Physiol.
2009
50

1886-1897
31 Miyamoto K., Kotake T., Sasamoto M., Saniewski M., and Ueda J. Gummosis in grape hyacinth (Muscari armeniacum) bulbs: hormonal regulation and chemical composition of gums J. Plant Res. 2010
123

363-370
32 Hirano K., Kotake T., Kamihara K., Tsuna K., Aohara T., Kaneko Y., Takatsuji H., Tsumuraya Y., and Kawasaki S. Rice BRITTLE CULM 3 (BC3) encodes a classical dynamin OsDRP2B essential for proper secondary cell wall synthesis.ndary cell wall synthesis Planta 2010
232

95-108
33 Soga K., Kotake T., Wakabayashi K. and Hoson T. 1-Aminocyclopropane-1-carboxylic acid (ACC)-induced reorientation of cortical microtubules is accompanied by a transient increase in the transcript levels of gamma-tubulin complex and katanin genes in azuki bean epicotyls J. Plant Physiol. 2010
167

1165-1171
34 Takeda H., Sugahara T., Kotake T., Nakagawa N., Sakurai N. Sugar treatment inhibited IAA-induced expression of endo-1,3:1,4-beta-glucanase EI transcripts in barley coleoptile segments Physiol. Plant. 2010
139

413-420
35
Takata R., Tokita K., Mori S., Shimoda R., Harada N., Ichinose H., Kaneko S., Igarashi K., Samejima M., Tsumuraya Y. and Kotake T.
Degradation of carbohydrate moieties of arabinogalactan-proteins by glycoside hydrolases from Neurospora crassa
Carbohydr. Res.
2010
345

2516-2522
36
Tryfona T., Liang H.-C., Kotake T., Kaneko S., Marsh J., Ichinose H., Lovegrove A., Tsumuraya Y., Shewry P. R., Stephens E. and Dupree P.
Carbohydrate structural analysis of wheat flour arabinogalactan protein
Carbohydr. Res.
2010
345

2648-2656
37
Partha S. K., Sadeghi-Khomami A., Slowski K., Kotake T., Thomas N. R., Jakeman D. L. and Sanders D. A.
Chemoenzymatic synthesis, inhibition studies and X-ray crystallographic analysis of the phosphono analogue of UDP-Galp as an inhibitor and mechanistic probe for UDP-galactopyranose mutase
J. Mol. Biol.
2010
403

578-590
38 Kotake T., Aohara T., Hirano K., Sato A., Kaneko Y., Tsumuraya Y., Takatsuji H. and Kawasaki S. Rice Brittle culm 6 encodes a dominant negative form of CesA protein that perturbs cellulose synthesis in secondary cell walls J. Exp. Bot. 2011
62

2053-2062
39
Kotake T., Hirata N., Degi Y., Ishiguro M., Kitazawa K., Takata R., Ichinose H., Kaneko S., Igarashi K., Samejima M, and Tsumuraya Y. Endo-beta-1,3-galactanase from winter mushroom Flammulina velutipes
J. Biol. Chem. 2011 286

27848-27854
40 Soga K., Kotake T., Wakabayashi K. and Hoson T. Changes in the transcript levels of microtubule associated protein MAP65-1 during reorientation of cortical microtubules in azuki bean epicotyls Act. Physiol. Plant. 2012
34

533-540
41 Yoshimura H., Kotake T., Aohara T., Tsumuraya Y., Ikeuchi M., Ohmori M.
The capsular polysaccharides contribute to salt tolerance in terrestrial cyanobacterium Nostoc sp. strain HK-01
J. Appl. Phycol.
2012
24

237-243
42 Michikawa M., Ichinose H., Momma M., Biely P., Jongkees S., Yoshida M., Kotake T., Tsumuraya Y., Withers S., Fujimoto Z. and Kaneko S. Structural and biochemical characterization of glycoside hydrolase family 79 beta-glucuronidase from Acidbacterium capsulatum J. Biol. Chem. 2012
287

14069-14077
43Tryfona T., Liang H.-C., Kotake T., Tsumuraya Y., Stephens E. and Dupree P. Structural characterisation of Arabidopsis leaf arabinogalactan polysaccharidesPlant Physiol.
2012
160

653-666
44Kitazawa K., Tryfona T., Yoshimi Y., Hayashi Y., Kawauchi S., Antonov L., Tanaka H., Takahashi T., Kaneko S., Dupree P., Tsumuraya Y. and Kotake T. beta-Galactosyl Yariv reagent binds to the beta-1,3-galactan of arabinogalactan-proteinsPlant Physiol.
2013
161

1117-1126
45
Geshi N., Johansen J.N., Dilokpimol A., Rolland A., Belcram K., Verger S., Kotake T., Tsumuraya Y., Kaneko S., Tryfona T., Dupree P., Scheller H.V., Höfte H., and Mouille G. A galactosyltransferase acting on arabinogalactan protein glycans is essential for embryo development in Arabidopsis Plant J.
2013
76

128-137
46 Endo M., Kotake T., Watanabe Y., Kimura K., and Tsumuraya Y. Biosynthesis of the carbohydrate moieties of arabinogalactan-proteins by membrane-bound beta-glucuronosyltransferases from radish primary roots Planta
2013 238

1157-1169
47 Kotake T., Hamamoto S., Saito T., Ohnishi J., Komatsu T., and Tsumuraya Y. Characterization of alkali-soluble polysaccharides in deep subsoil layers Soil Sci. Plant Nutr.
2013 59

871-876
48 Knoch E., Dilokpimol A., Tryfona T., Poulsen C., Xiong G., Harholt J., Petersen B., Ulvskov P., Hadi M., Kotake T., Tsumuraya Y., Pauly M., Dupree P., Geshi N. A ƒÀ-glucuronosyltransferase from Arabidopsis thaliana involved in biosynthesis of type II arabinogalactan has a role in cell elongation during seedling growth Plant J. 2013 76

1016-1029
49 Shimoda R., Okabe K., Kotake T., Matsuoka K., Koyama T., Tryfona T., Liang H.-C., Dupree P., Tsumuraya Y. Enzymatic fragmentation of carbohydrate moieties of radish arabinogalactan-protein and elucidation of the structures Biosci. Biotech. Biochem. 2014
78

418-431
50Eda M., Ishimaru M., Tada T., Sakamoto T., Kotake T., Tsumuraya Y., Mort AJ., Gross KC.Enzymatic activity and substrate specificity of the recombinant tomato beta-galactosidase 1J. Plant Physiol.
2014
171

1454-1460
51Miyamoto K., Kotake T., Jarecka A.B., Saniewski M., Ueda J.Hormonal regulation of gummosis and composition of gums from bulbs of hyacinth (Hyacinthus orientalis)J. Plant Physiol.2015
174

1-4
52Kuge T., Nagoya H., Tryfona T., Kurokawa T., Yoshimi Y., Dohmae N., Tsubaki K., Dupree P., Tsumuraya Y., Kotake T.Action of an endo-beta-1,3(4)-glucanase on cellobiosyl unit structure in barley beta-1,3:1,4-glucanBiosci. Biotech. Biochem.2015
79

1810-1817
53Inaba M., Maruyama T., Yoshimi Y., Kotake T., Matsuoka K., Koyama T., Tryfona T., Dupree P., Tsumuraya Y.L-Fucose-containing arabinogalactan-protein in radish leavesCarbohydr. Res. 2015
415

1-11
54Wakabayashi K., Soga K., Hoson T., Kotake T., Yamazaki T., Higashibata A., Ishioka N., Shimazu T., Fukui K., Osada I., Kasahara H., Kamada M. Suppression of Hydroxycinnamate network formation in cell walls of rice shoots grown under microgravity conditions in spacePLoS One 2015
10

e0137992
55Sawake S., Tajima N., Mortimer J.C., Ishikawa T., Yu X., Yamanashi Y., Yoshimi Y., Kawai-Yamada M., Dupree P., Tsumuraya Y., Kotake T.KONJAC1 and 2 are key factors for generation of GDP-mannose and affect L-ascorbic acid and glucomannan biosynthesis in ArabidopsisPlant Cell
2015
27

3397-3409
56Mizukami A.G., Inatsugi R., Jiao J., Kotake T., Kuwata K., Ootani K., Okuda S., Sankaranarayanan S., Satoo Y., Maruyama D., Iwai H., Garénaux E., Sato C., Kitajima K., Tsumuraya Y., Mori H., Yamaguchi J., Itami K., Sasaki N., and Higashiyama T.The AMOR arabinogalactan sugar chain induces pollen-tube competency to respond to ovular guidanceCurr. Biol.
2016
26

1091-1097
57 Ookawa T., Aoba R., Yamamoto T., Ueda T., Takai T., Fukuoka S., AndoT., Adachi S., Matsuoka S., Ebitani T., Kato Y., Mulsanti I.W., Kishii M., Reynolds M., PiñeraF., Kotake T., Kawasaki S., Motobayashi T., and Hirasawa T. Precise estimation of genome regions controlling lodging resistance using a set of reciprocal chromosome segment substitution lines in rice Sci. Rep.
2016
6

30572
58 Murakami M., Soga K., Kotake T., Kato T., Hashimoto T., Wakabayashi1 K., and Hoson T. Roles of MAP65-1 and BPP1 in gravity resistance of Arabidopsis hypocotyls Biol. Sci. Space 2016 1

1-7
59 Yoshimi Y., Sugawara Y., Hori C., Igarashi K., Kaneko S., Tsumuraya Y., and Kotake T. A protease/peptidase from culture medium of Flammulina velutipes that acts on arabinogalactan-protein Biosci. Biotech. Biochem. 2017 81

478-485
60
Hirano K., Matsuda R., Takase W., Morinaka Y., Kawamura M., Takeuchi Y., Takagi H., Yaegashi H., Natsume S., Terauchi R., Kotake T., Matsuoka M., and Sazuka T. Screening of rice mutants with improved saccharification efficiency results in the identification of CONSTITUTIVE PHOTOMORPHOGENIC 1 and GOLD HULL AND INTERNODE 1 Planta 2017 246

61-74
61
Wakabayashi K., Soga K., Hoson T., Kotake T., Kojima M., Sakakibara H., Sakakibara H., Yamazaki T., Higashibata A., Ishioka N., Shimazu T., and Kamada M. Persistence of plant hormone levels in rice shoots grown under microgravity conditions in space: Its relationship to maintenance of shoot growth Physiol. Plant. 2017 161

285-293
62
Imaizumi C., Tomatsu H., Kitazawa K., Yoshimi Y., Shibano S., Kikuchi K., Yamaguchi M., Kaneko S.,  Tsumuraya Y., and Kotake T. Heterologous expression and characterization of an Arabidopsis ƒÀ-L-arabinopyranosidase and ƒ¿-D-galactosidases acting on ƒÀ-L-arabinopyranosyl residues  J. Exp. Bot. 2017 68

4651-4661
63
Ruprecht C., Bartetzko M.P., Senf D., Dallabernadina P., Andersen M.C.F., Kotake T., Knox J.P., Hahn M.G., Clausen M.H., and Pfrengle F. A synthetic glycan microarray enables epitope mapping of plant cell wall glycan-directed antibodies Plant Physiol. 2017 175

1094-1104
64
Yoshimi Y., Yaguchi K., Kaneko S., Tsumuraya Y., and Kotake T. Properties of fungal endo-ƒÀ-1,3-galactanases and their synergistic action on arabinogalactan-proteins with an exo-ƒÀ-1,3-galactanase.
Carbohydr. Res.2017453

26-35
65
Soga K., Yamazaki C., Kamada M., Tanigawa N., Kasahara H., Yano S., Kojo K.H., Kutsuna N., Kato T., Hashimoto T., Kotake T., Wakabayashi K., and Hoson T. Modification of growth anisotropy and cortical microtubule dynamics in Arabidopsis hypocotyls grown under microgravity conditions in space Physiol. Plant. 2018
162

135-144
66 Sato K., Hara K., Yoshimi Y., Kitazawa K., Ito H., Tsumuraya Y., and Kotake T.
Yariv reactivity of type II arabinogalactan from larch wood Carbohydr. Res. 2018 467

8-13
67Yu L., Lyczakowski J.J., Pereira C.S., Kotake T., Yu X., Li A., Mogelsvang S., Skaf M.S., and Dupree P.The patterned structure of galactoglucomannan suggests it may bind to cellulose in seed mucilagePlant Physiol.2018178

1011-1026



Reviews 
No.
Authors
Title
Journal
Year
Vol
Issue
Page
1
Kotake T., Hirata N., Kitazawa K., Soga K. and Tsumuraya Y.
Arabinogalactan-proteins in the evolution of gravity resistance in land plants
Biol. Sci. Space  
2009
23

143-149
2
Kotake T., Hirosawa C., Ando Y. and Tsumuraya Y. Generation of nucleotide sugars for biomass formation in plants. Plant Biotechnol. 2010
27

231-236
3
Soga K., Yamaguchi A., Kotake T., Wakabayashi K. and Hoson T. Transient increase in the levels of gamma-tubulin complex and katanin are responsible for reorientation by ethylene and hypergravity of cortical microtubules Plant Signal. Behav.
2010
5

1-3
4
Kotake T., Yamanashi Y., Imaizumi C. and Tsumuraya Y.
Metabolism of L-arabinose in plants
J. Plant Res.
2016
129

781-792