・Dayarathne K, Ishikawa T, Aikeranmu K, Yamaguchi M, Kawai-Yamada M (2024) The effect of light availability and light wavelength on growth, 2-MIB biosynthesis, and 2-MIB-related gene expression in Pseudanabaena foetida var. intermedia. Arch. Microbiol. 206: 367 Link
・Aikeranmu K, Ishikawa Y, Dayarathne K, Miyagi A, Ishikawa T, Yamaguchi M, Kawai-Yamada M (2024) The deficiency of methylglyoxal synthase promotes cell proliferation in Synechocystis msp. PCC 6803 under mixotrophic conditions. Plant Biotechnol. in press
・ Nagahage ISP, Matsuda K, Miyashita K, Fujiwara S, Mannapperuma C, Yamada T, Sakamoto S, Ishikawa T, Nagano M, Ohtani M, Kato K, Uchimiya H, Mitsuda N, Kawai-Yamada M, Demura T, Yamaguchi M* (2023) NAC domain transcription factors VNI2 and ATAF2 form protein complexes, and regulate leaf senescence. Plant Directs 7: e529 Link
・Dayarathne K, Ishikawa T, Watanabe S, Ishikawa Y, Aikeranmu K, Kitagawa H, Komatsubara N, Yamaguchi M, Kawai-Yamada M (2023) Heterologous expression of mtf and mtc genes of Pseudanabaena foetida var. intermedia is sufficient to produce 2-methylisoborneol in Escherichia coli. Microbiol. Spectr. 11: e02561-23 Link
・Chaomurilege, Miyagi A, Ishikawa T, Yamaguchi M, Murayama H, Kawai-Yamada M (2023) Metabolic changes associated with dark-induced leaf senescence in Arabidopsis nadk2 mutants. Plant Signal. Behav. 283: 2215618 Link
・Suzuki S, Tanaka D, Miyagi A, Takahara K, Kono M, Chaomurilege, Noguchi K, Ishikawa T, Nagano M, Yamaguchi M, Kawai-Yamada M (2023) Loss of peroxisomal NAD kinase 3 (NADK3) affects photorespiration metabolism in Arabidopsis. J. Plant Physiol. 283: 153950 Link
・Chaomurilege, Zu Y, Hashida SN, Ishikawa T, Yamaguchi M, Kawai-Yamada M (2023) Loss of chloroplast-localized NAD kinase causes ROS stress in Arabidopsis thaliana. J. Plant Res. 136: 97–106 Link
・Miyagi A, Mori K, Ishikawa T, Ohkubo S, Adachi S, Yamaguchi M, Ookawa T, Kotake T, Kawai-Yamada M (2022) Metabolomic analysis of rice brittle culm mutants reveals each mutant-specific metabolic pattern in each organ. Metabolomics 18: 95 Link
・Ukawa T, Banno F, Ishikawa T, Kasahara K, Nishina Y, Inoue R, Tsujii K, Yamaguchi M, Takahashi T, Fukao Y, Kawai-Yamada M, Nagano M (2022) Sphingolipids with 2-hydroxy fatty acids aid in plasma membrane nanodomain organization and oxidative burst. Plant Physiol. 189: 839–857 Link
・Ailizati A, Nagahage ISP, Miyagi A, Ishikawa T, Kawai-Yamada M, Demura T, Yamaguchi M* (2022) VNI2 effectively inhibits transcriptional activities of VND7 through a conserved sequence. Plant Biotechnol. 39: 147–153 Link
・Ailizati A, Nagahage ISP, Miyagi A, Ishikawa T, Kawai-Yamada M, Demura T, Yamaguchi M* (2021) An Arabidopsis NAC domain transcriptional activator VND7 negatively regulates VNI2 expression. Plant Biotechnol. 38: 415–420 Link
・Tanaka M, Ishikawa Y, Suzuki S, Ogawa T, Taniguchi YY, Miyagi A, Ishikawa T, Yamaguchi M, Munekage YN, Kawai-Yamada M (2021) Change in expression levels of NAD kinase-encoding genes in Flaveria Species. J. Plant Physiol. 265: 153495 Link
・Ishikawa Y, Cassan C, Kadeer A, Yuasa K, Sato N, Sonoike K, Kaneko Y, Miyagi A, Takahashi H, Ishikawa T, Yamaguchi M, Nishiyama Y, Hihara Y, Gibon Y, Kawai-Yamada M (2021) The NAD kinase Slr0400 functions as growth repressor in Synechocystis PCC 6803. Plant Cell Physiol. 62: 668–677 Link
・Kawai-Yamada M, Miyagi A, Sato Y, Hosoi Y, Hashida SN, Ishikawa T, Yamaguchi M (2021) Altered metabolism of chloroplastic NAD kinase-overexpressing Arabidopsis in response to magnesium sulfate supplementation. Plant Signal. Behav. 16: 1844509 Link
・Nagahage ISP, Sakamoto S, Nagano M, Ishikawa T, Kawai-Yamada M, Mitsuda N, Yamaguchi M* (2020) An Arabidopsis NAC domain transcription factor, ATAF2, promotes age-dependent and dark-induced leaf senescence. Physiol. Plant. 170: 299–308 Link
・Sato M, Nagano M, Jin S, Miyagi A, Yamaguchi M, Kawai-Yamada M, Ishikawa T (2020) Plant -unigue cis/trans isomerism of long-chain base unsaturation is selectively required for Alminum tolerance resulting from glucosylceramide-dependent plasma membrane fluidity. Plants 9: 19 Link
・Wang S, Yamaguchi M, Grienenberger E, Martone PT, Samuels AL, Mansfield S (2020) The Class II KNOX genes KNAT3 and KNAT7 work coorperatively to influence secondary cell wall deposition and provide mechanical support to Arabidopsis stem. Plant J. 101: 293–309 Link
・Tamura T, Endo H, Suzuki A, Sato Y, Kato K, Ontani M, Yamaguchi M*, Demura T* (2019) Affinity-based high-resolution analysis of DNA binding by VASCULAR-RELATED NAC-DOMAIN7 via fluorescence correlation spectorscopy. Plant J. 100: 298–313 Link
・Ishikawa Y, Miyagi A, Ishikawa T, Nagano M, Yamaguchi M, Hihara Y, Kaneko Y, Kawai-Yamada M (2019) One of the NAD kinases, sll1415, is required for the glucose metabolism of Synechocystis sp. PCC 6803.Plant J. 98: 654–666 Link
・Saelim L, Akiyoshi N, Tan TT, Ihara A, Yamaguchi M, Hirano K, Matsuoka M, Demura T, Ohtani M (2019) Arabidopsis Group IIId ERF proteins positively regulate primary cell wall-type CESA genes. J. Plant Res. 132: 117–129 Link
・Nagahage ISP, Sakamoto S, Nagano M, Ishikawa T, Kawai-Yamada M, Mitsuda N, Yamaguchi M* (2018) An NAC domain transcription factor ATAF2 acts as transcriptional activator or repressor dependent on promoter context. Plant Biotechnol. 35: 285-289 Link
・Okada T, Yamane S, Yamaguchi M, Kato K, Shinmyo A, Tsunemitsu Y, Iwasaki K, Ueno D, Demura T (2018) Characterizationo of rice KT/HAK/KUP potassium transporters and K+ uptake by HAK1 from Oryza sativa. Plant Biotechnol. 35: 101-111 Link
・Tan TT, Endo H, Sano R, Kurata T, Yamaguchi M, Ohtani M, Demura T (2018) Transcription factors VND1-VND3 contribute to cotyledon xylem vessel formation. Plant Physiol. 176: 773-789 Link ・Miyagi A, Kitano S, Oono Y, Hase Y, Narumi I, Yamaguchi M, Uchimiya H, Kawai-Yamada M (2018) Evaluation of metabolic changes in oxalate-rich plant Rumex obtusifolius L. caused by ion beam irradiation. Plant Physiol. Biochem. 122: 40-45 Link
・Imaizumi C, Tomatsu H, Kitazawa K, Yoshimi Y, Shibano S, Kikuchi K, Yamaguchi M, Kaneko Y, Tsumuraya Y, Kotake T (2017) Heterologous expression and characterization of an Arabidopsis β-L-arabinopyranosidase and α-D-galactosidases acting on β-L-arabinopyranosyl residues. J. Exp. Bot. 68: 4651-4661 Link
・Ishikawa Y, Miyagi A, Haishima Y, Ishikawa T, Nagano M, Yamaguchi M, Hihara Y, Uchimiya H, Kawai-Yamada M (2016) Metabolomic analysis of NAD kinase-deficient mutants of the cyanobacterium Synechocystis sp. PCC6803. J. Plant Physiol. 205: 105-112 Link
・Noda S, Koshiba T, Hattori T, Yamaguchi M, Suzuki S, Umezawa T (2015) The expression of a rice secondary wall-specific cellulose synthase gene, OsCesA7, is directly regulated by a rice transcription factor, OsMYB56/83. Planta 242: 589–600 Link
・Nakano Y, Yamaguchi M, Endo H, Rejab NA, Ohtani M (2015) NAC-MYB based transcription regulation of secondary cell wall biosynthesis in land plants. Front. Plant Sci. 6: 288 Link
・Yamaguchi M*, Nagahage ISP, Ohtani M, Ishikawa T, Uchimiya H, Kawai-Yamada M, Demura T (2015) Arabidopsis NAC domain proteins VND-INTERACTING1 and ANAC103 interacti with multiple NAC domain proteins. Plant Biotechnol. 32: 119-123 Link
・Endo H, Yamaguchi M, Tamura T, Nakano Y, Nishikubo N, Yoneda A, Kato K, Kubo M, Kajita S, Katayama Y, Ohtani M, Demura T (2015) Multiple classes of transcription factors regulate the expression of VASCULAR-RELATED NAC-DOMAIN7, a master switch of xylem vessel differentiation. Plant Cell Physiol. 56: 242-254 Link
・Kitano S, Miyagi A, Oono Y, Hase Y, Narumi I, Yamaguchi M, Uchimiya H, Kawai-Yamada M (2015) Metabolic alterations in leaves of oxalate-rich plant Rumex obtusifolius L. irradiated by gamma rays. Metabolomics 11: 124-142 Link
・Xu B, Ohtani M, Yamaguchi M, Toyooka K, Wakazaki M, Sato M, Kubo, Nakano Y, Sano R, Hiwatashi Y, Murata T, Kurata T, Yoneda A, Kato K, Hasebe M, Demura T (2014) Contribution of NAC domain transcription factors to plant adaptation to land. Science 343: 1505-1508 Link ・Kakimoto M, Ishikawa T, Miyagi A, Saito K, Miyazaki M, Asaeda T, Yamaguchi M, Uchimiya H, Kawai-Yamada M (2014) Culture temperature affects gene expression and metabolic pathway in the 2-methylisoborneol-producing cyanobacterium Pseudanabaena galeata. J. Plant Physiol. 171: 292-300 Link
・Matuura H, Takenami S, Kubo Y, Ueda K, Ueda A, Yamaguchi M, Hirata K, Demura T, Kanaya S, Kato K (2013) A computational and experimental approach rebeals that the 5'-proximal region of the 5'-UTR has a Cis-regulatory signature reponsible for heat stress-regulated mRNA translation in Arabidopsis. Plant Cell Physiol. 54: 474-483 Link
・Noda S, Yamaguchi M, Tsurumaki Y, Takahashi Y, Nishikubo N, Hattori T, Demura T, Suzuki S, Umezawa T (2013) ATL54, a ubiquitin ligase gene related to secondary cell wall formation, is transcriptionally regulated by MYB46. Plant Biotechnol. 30: 503–509 Link
・Noda S, Takahashi Y, Tsurumaki Y, Yamamura M, Nishikubo N, Yamaguchi M, Sakurai N, Suzuki H, Demura T, Shibata D, Suzuki S, Umezawa T (2013) ATL54, a RING-H2 domain protein selected by a gene co-expression network analysis, is associated with secondary cell wall formation in Arabidopsis. Plant Biotechnol. 30: 169–177 Link
・Ueda K, Matuura H, Yamaguchi M, Demura T, Kato K (2012) Genome wide anaylses of changes in translation state caused by elevated temperature in Oriza sativa. Plant Cell Physiol. 53: 1481-1491 Link
・Matsui T, Matsuura H, Sawada K, Takita E, Kinjo S, Takenami S, Ueda K, Nishigaki N, Yamasaki S, Hata K, Yamaguchi M, Demura T, Kato K (2012) High level expression of transgenes by use of 5'-untranslated region of the Arabidopsis thaliana arabinogalactan protein 21 gene in dicotyledons. Plant Biotechnol. 29: 319–322 Link
・Ohtani M, Nishikubo N, Xu B, Yamaguchi M, Mitsuda N, Goué N, Shi F, Ohme-Takagi M, Demura T (2011) A NAC domain protein family contributing to regulation of wood formation in poplar. Plant J. 67: 499-512 Link
・Yamaguchi M, Mitsuda N, Ohtani M, Ohme-Takagi M, Kato K, Demura T (2011) VASCULAR-RELATED NAC-DOMAIN7 directly regulates expression of a broad range of genes for xylem vessel formation. Plant J. 66: 579–590 Link
・Matsuura H, Ueda K, Ishibashi Y, Kubo Y, Yamaguchi M, Hirata K, Demura T, Kato K (2010) A short period mannitol stress but not LiCl stress led to global translational repression in plants. Biosci. Biotechnol. Biochem. 74: 2110-2112 Link
・Yamaguchi M, Goué N, Igarashi H, Ohtani M, Nakano Y, Mortimer JC, Nishikubo N, Kubo M, Katayama Y, Kakegawa K, Dupree P, Demura T (2010) VASCULAR-RELATED NAC-DOMAIN6 and VASCULAR-RELATED NAC-DOMAIN7 effectively induce transdifferentiation into xylem vessel elements under control of an induction system. Plant Physiol. 153: 906-914 Link
・Nakano Y, Nishikubo N, Goué N, Ohtani M,Yamaguchi M, Katayama Y, Demura T (2010) MYB transcription factors orchestrating the developmental program of xylem vessels in Arabidopsis roots. Plant Biotechnol. 27: 267-272 Link
・Yamaguchi M, Demura T (2010) Transcriptional regulation of secondary cell wall formation controlled by NAC domain proteins. Plant Biotechnol. 27: 237-242 Link
・Yamaguchi M, Ohtani M, Mitsuda N, Ohme-Takagi M, Fukuda H, Demura T (2010) VND-INTERACTING2, NAC domain transcription factor, negatively regulates xylem vessel formation in Arabidopsis. Plant Cell 22: 1249–1263 Link
・Endo S, Pesquet E, Yamaguchi M, Tashiro G, Sato M, Toyooka K, Nishikubo N, Udagawa-Motose M, Kubo M, Fukuda H, Demura T (2009) Identification of new components paritcipating in the secondary cell wall formation of vessel elements in Zinna and Arabidopsis. Plant Cell 21: 1155–1165 Link
・Yamaguchi M, Kubo M, Fukuda H, Demura T (2008) VASCULAR-RELATED NAC-DOMAIN7 is involved in the differentiation of all types of xylem vessels in Arabidopsis roots and shoots. Plant J. 55: 652–664 Link
・Hashimoto K, Igarashi H, Mano S, Takenaka C, Shiina T, Yamaguchi M, Demura T, Nishimura M, Shinmen T, Yokota E (2008) An isoform of Arabidopsis myosin XI interacts with small GTPases in its C-terminal tail region.J. Exp. Bot. 59: 3523–3531 Link
・Kubo M, Udagawa M, Nishikubo N, Horiguchi G, Yamaguchi M, Ito J, Mimura T, Fukuda H, Demura T (2005) Transcriptional switches for protoxylem and metaxylem vessel formation. Genes Dev. 19: 1855-1860 Link
・Umeda M, Shimotohno A, Yamaguchi M (2005) Control of cell division and transcription by cyclin-dependent kinase-activating kinases in plants. Plant Cell Physiol. 50: 1437-1442 Link
・Yamaguchi M, Kato H, Yoshida S, Yamamura S, Uchimiya H (2003) Control of in vitro organogenesis by cyclin-dependent kinase activites in plants. Proc. Natl. Acad. Sci. USA 100: 8019-8023 Link
・Lee J, Das A, Yamaguchi M, Hashimoto J, Tsutsumi N, Uchimiya H, Umeda M (2003) Cell cycle function of a rice B2-type cyclin interacting with a B-type cyclin dependent kinase. Plant J. 34: 417-425 Link
・Shimotohno A, Matsubayashi S,Yamaguchi M, Uchimiya H, Umeda M (2003) Differential phosphoylation activities of CDK-activating kinases in Arabiopsis thaliana. FEBS Lett. 534: 69-74 Link
・Ueda T, Yamaguchi M, Uchimiya H, Nakano A (2001) Ara6, a plant-unique type Rab-GTPase, functions in the endocytic pathway of Arabidopsis thaliana. EMBO J. 20: 4730-4741 Link
・Yamaguchi M, Fabian T, Sauter M, Bhalerao RP, Schrader J, Sandberg G, Umeda M, Uchimiya H (2000) Activation of CDK-activating kinase is depedent on interation with H-type cyclins in plants. Plant J. 24: 11-20 Link
・Umeda M, Umeda-Hara C, Yamaguchi M, Hashimoto J, Uchimiya H (1999) Differential expression of genes for cyclin-dependent kinases in rice plants. Plant Physiol. 119: 31-40 Link
・Umeda M, Iwamoto N, Umeda-Hara C, Yamaguchi M, Hashimoto J, Uchimiya H (1999) Molecular characterization of mitotic cylings in rice plants. Mol. Gen. Genet. 262: 230-238 Link
・Yamaguchi M, Umeda M, Uchimiya H (1998) A rice homolog of Cdk7/MO15 phosphorylates both cyclin-dependent protein kinases and the carboxy-terminal domain of RNA polymerase II. Plant J. 16: 613-619 Link
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